scButterfly.data_processing.CLR_transform

scButterfly.data_processing.CLR_transform(ADT_data)

Centered log-ratio transformation for ADT data.

Parameters:

ADT_data (Anndata) – ADT anndata for processing.

Returns:

• ADT_data_processed (Anndata) – ADT data with CLR transformation preprocessed.

• gmean_list – vector of geometric mean for ADT expression of each cell.